Return to main results Retrieve Phyre Job Id

Job DescriptionP45421
Confidence92.91%DateThu Jan 5 12:02:34 GMT 2012
Rank8Aligned Residues103
% Identity17%Templatec3jwnF_
PDB info PDB header:protein binding/cell adhesionChain: F: PDB Molecule:protein fimf; PDBTitle: complex of fimc, fimf, fimg and fimh
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........ 30.........40.........50.........60.........70.........80........ .90..
Predicted Secondary structure 




..
































......
Query SS confidence 








. .


























































. . . . . .



Query Sequence  CNISSSIQN. . IDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGS. . . . . . LNLI
Query Conservation 





 
 ..



   
       
     
 
   


 
  
  
 
   
      




  
 ......  
 
Alig confidence 








..











.













































......



Template Conservation 
 
        
 

 
      .          
 
    
        
 
 
                  
 



 
Template Sequence  CSVAAESTNFTVDLMENAAKQFN. NIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQ
Template Known Secondary structure 
TGGGS








STT

.STT
B



TT

S
TT


SSSB
BS
Template Predicted Secondary structure 







.






























Template SS confidence 















































































   16...20.........30........ .40.........50.........60.........70.........80.........90....
 
   93......100.........110.........120......
Predicted Secondary structure 















Query SS confidence 

































Query Sequence  ASDAFSGSNNLDLALASGKNDNPGSTGTASISTS
Query Conservation   


 


  
 

        
    
    
 
Alig confidence 



..



























Template Conservation 
   ..                            
Template Sequence  LLNE. . QQNQIPLNAPSSALSWTTLTPGKPNTLN
Template Known Secondary structure  T..TS
B

TT

TTTS



TTS
Template Predicted Secondary structure 

..















Template SS confidence 

































   95... .100.........110.........120......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions