 |
Job Description | P45421 | Confidence | 4.97% | Date | Thu Jan 5 12:02:34 GMT 2012 |
Rank | 67 | Aligned Residues | 51 |
% Identity | 16% | Template | c2o2tB_ |
PDB info |
PDB header:structural protein | Chain: B: PDB Molecule:multiple pdz domain protein; |
PDBTitle: the crystal structure of the 1st pdz domain of mpdz
|
Resolution | 2.70 Å |
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | P | N | G | S | L | N | L | I | A | S | D | A | F | S | G | S | N | N | L | D | L | A | L | A | S | G | K | N | D | N | P | G | S | T | G | T | A | S | I | S | T | S | P | N | N | W | L | V | F | M | Q | N | G | Q | E | V |
Query Conservation |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |
|
|   |
|   |   |
|   | . |   |
|
|   |
|   |   |   |
|   | . | . | . | . |
|   |   |
|
|   |
|
|   |
| . |
|
|   |   |
|
Template Sequence |   |
P | P | S | G | G | L | G | F | S | V | V | G | L | R | S | E | E | L | G | I | F | V | Q | E | I | Q | . |
E | G | S | V | A | H | R | D | G | R | . |
. |
. |
. |
L | K | E | T | D | Q | I | L | A | I | . |
N | G | Q | A | L |
Template Known Secondary structure |   |
| S | S | S |
| S | S |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | T | T | S |  |  |  |  |  |
|
| . | . | . | . |
|
| T | T |
|  |  |  |  |  | . | T | T |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |  | . |
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | |
|
|
|
. | 180 | . | . | . | . | . | . | . | . | |
. | 190 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|