Job Description P45421 Confidence 6.76% Date Thu Jan 5 12:02:34 GMT 2012 Rank 50 Aligned Residues 146 % Identity 13% Template c2jmrA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:fimf; PDBTitle: nmr structure of the e. coli type 1 pilus subunit fimf Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90
Predicted Secondary structure											.	.																																					.	.	.	.																			.	.	.	.
Query SS confidence											.	.																																					.	.	.	.																			.	.	.	.
Query Sequence		C	N	I	S	S	S	I	Q	N	.	.	I	D	Y	G	K	R	S	A	A	M	R	Q	V	D	R	G	K	T	T	Q	L	A	D	R	T	I	T	L	V	M	Q	C	D	Q	D	A	.	.	.	.	H	I	R	V	Q	L	N	T	A	N	I	S	N	N	G	F	G	F	.	.	.	.	G	P	N	G	S	L	N
Query Conservation											.	.																																					.	.	.	.																			.	.	.	.
Alig confidence											.	.																	.	.	.																		.	.	.	.																			.	.	.	.
Template Conservation																													.	.	.
Template Sequence		C	S	V	A	A	E	S	T	N	F	T	V	D	L	M	E	N	A	A	K	Q	F	N	N	I	G	A	.	.	.	T	T	P	V	V	P	F	R	I	L	L	S	P	C	G	N	A	V	S	A	V	K	V	G	F	T	G	V	A	D	S	H	N	A	N	L	L	A	L	E	N	T	V	S	A	A	S	G	L	G
Template Known Secondary structure																	B			G	G	G			S	T	T		.	.	.	B										B		S			S													B		S	S		T	T	S	B					S	T	T	B		S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	S	D	A	F	S	G	S	N	N	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V	I	D	S	G	K	S	V	S	L	T	L	T	M	A	P	A	F	K	D	E	G	E	L	T	D	M	T	D	I
Query Conservation
Alig confidence							.	.																																					.	.						.	.	.
Template Conservation							.	.																																					.	.						.	.	.
Template Sequence		I	Q	L	L	N	.	.	E	Q	Q	N	Q	I	P	L	N	A	P	S	S	A	L	S	W	T	T	L	T	P	G	K	P	N	T	L	N	F	Y	A	R	L	M	A	.	.	T	Q	V	P	V	.	.	.	T	A	G	H	I	N	A	T	A	T	F	T	L	E	Y	Q	D	N	H	H	H	H	H	H	K	Q	A
Template Known Secondary structure							.	.	T	T			B			S	S	S		G	G	G	S							S	S	S		B											.	.	S	S				.	.	.																	S				S					S
Template Predicted Secondary structure							.	.																																					.	.						.	.	.
Template SS confidence
		94	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		171	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	N	L	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	T	I	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions