Job Description P45421 Confidence 9.29% Date Thu Jan 5 12:02:34 GMT 2012 Rank 35 Aligned Residues 61 % Identity 13% Template c2eaqA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:lim domain only protein 7; PDBTitle: crystal structure of pdz domain of kiaa0858 (lim), ms07932 from homo sapiens Resolution 1.46 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	R	V	Q	L	N	T	A	N	I	S	N	N	G	F	G	F	G	P	N	G	S	L	N	L	I	A	S	D	A	F	S	G	S	N	N	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V	I	D	S	G
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																				.						.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																				.						.	.	.
Template Sequence		D	M	R	I	S	I	N	Q	T	P	G	K	S	L	D	F	G	F	T	I	K	W	.	.	.	.	.	.	.	.	.	.	.	D	I	P	G	I	F	V	A	S	V	E	.	.	.	.	.	.	A	G	S	P	A	E	F	S	Q	L	Q	V	D	D	E	I	I	A	I	.	N	N	T	K	F	.	.	.	S	Y
Template Known Secondary structure											T	T		S	S			S						.	.	.	.	.	.	.	.	.	.	.		T	T									.	.	.	.	.	.	T	T	S					T	T			T	T							.	T	T				.	.	.		T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																				.						.	.	.
Template SS confidence
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.												.	.	.	.	.	.	.	.	1070	.	.							.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.		.	.	.	.	.				.	.
		146	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1099	1100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions