Job Description P45421 Confidence 7.16% Date Thu Jan 5 12:02:34 GMT 2012 Rank 47 Aligned Residues 63 % Identity 16% Template c2d8iA_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:t-cell lymphoma invasion and metastasis 1 PDBTitle: solution structure of the pdz domain of t-cell lymphoma2 invasion and metastasis 1 varian Resolution UNK

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.													.	.	150	.	.	.	.
Predicted Secondary structure																	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	N	L	I	A	S	D	A	F	S	G	S	N	N	.	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V	I	D	S	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	V	S	L	T	L	T	M
Query Conservation																	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.								.										.	.	.	.	.											.						.	.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.										.	.	.	.	.											.						.	.	.
Template Sequence		T	Y	G	F	S	L	S	S	V	E	E	D	G	I	R	R	L	Y	V	N	S	V	K	.	E	T	G	L	A	S	K	K	G	.	.	.	.	.	L	K	A	G	D	E	I	L	E	I	.	N	N	R	A	A	.	.	.	D	A	L	N	S	S	M	L	K	D	F	L	S	Q	P	S	L	G	L	L	V	R	T
Template Known Secondary structure													T	T											.	T	T	S	S					T	.	.	.	.	.			T	T							.	S	S		B	G	.	.	.	G	G											T	S	S
Template Predicted Secondary structure																									.										.	.	.	.	.											.						.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.		.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	F	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	E	L	E	E
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions