Job Description P45421 Confidence 15.87% Date Thu Jan 5 12:02:34 GMT 2012 Rank 25 Aligned Residues 58 % Identity 22% Template c1y7nA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the second pdz domain of the human2 neuronal adaptor x11alpha Resolution UNK

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		N	I	S	N	N	G	F	G	F	G	P	N	G	S	L	N	L	I	A	S	D	A	F	S	G	S	N	N	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V	I	D	S	G	K	S	V	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.											.						.	.	.						.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.											.						.	.	.
Template Sequence		P	D	L	R	Y	Q	L	G	F	S	V	Q	N	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	S	L	M	.	R	G	G	I	A	E	R	G	G	.	.	.	.	.	V	R	V	G	H	R	I	I	E	I	.	N	G	Q	S	V	.	.	.	V	A	T	P	H	E	K	I	V	H	I
Template Known Secondary structure		S	S	T	T	S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	T	T	S						T	.	.	.	.	.			S	S							.	T	T				.	.	.	T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.											.						.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																.	.	.	.	.		40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.		.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.
								149	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	S	L	T	L	T	M	A	P	A
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	N	A	V	G	E	I	H	M	K	T	M	P	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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