Job Description P45421 Confidence 5.14% Date Thu Jan 5 12:02:34 GMT 2012 Rank 62 Aligned Residues 77 % Identity 4% Template c1xt5A_ PDB info PDB header:immune system Chain: A: PDB Molecule:variable region-containing chitin-binding PDBTitle: crystal structure of vcbp3, domain 1, from branchiostoma2 floridae Resolution 1.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	I	S	S	S	I	Q	N	I	D	Y	G	K	R	S	A	A	M	R	Q	V	D	R	G	K	T	T	Q	L	A	D	R	T	I	T	L	V	M	Q	C	D	Q	D	A	H	I	R	V	Q	L	N	T	A	N	I	S	N	N	G	F	G	F	G	P	N	G	S	L	N	L	I	A	S	D	A	F	S	G
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		C	S	Y	Q	L	A	N	D	T	Q	P	.	.	P	V	I	S	W	L	K	G	A	S	P	D	R	S	T	K	V	F	K	G	N	Y	N	W	Q	G	E	G	L	G	F	V	E	S	D	S	Y	K	E	S	F	G	D	F	L	G	R	A	S	V	A	N	L	A	A	P	T	L	R	L	T	H	V	H	P	Q
Template Known Secondary structure								T			S		.	.									S	S	S	S	S														T	T					T	T	S							G	G	G	T	T	T				S		T	T	S							S			G	G
Template Predicted Secondary structure													.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions