Job Description P45421 Confidence 10.22% Date Thu Jan 5 12:02:34 GMT 2012 Rank 29 Aligned Residues 68 % Identity 16% Template c1u39A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains Resolution UNK

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	D	A	H	I	R	V	Q	L	N	T	A	N	I	S	N	N	G	F	G	F	G	P	N	G	S	L	N	L	I	A	S	D	A	F	S	G	S	N	N	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V
Query Conservation
Alig confidence												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.						.
Template Conservation												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.						.
Template Sequence		P	P	V	T	T	V	L	I	R	R	.	.	.	P	D	L	R	Y	Q	L	G	F	S	V	Q	N	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	S	L	M	.	.	.	.	.	.	R	G	G	I	A	E	R	G	G	V	R	V	G	H	R	I	I	E	I	.	N	G	Q	S	V	.
Template Known Secondary structure												.	.	.	S	S	S	S				S					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	T	T	S	T					T			T	T							.	T	T			G	.
Template Predicted Secondary structure												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.						.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.
		142	.	.	.	.													.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	S	G	K	.	.	.	.	.	.	.	.	.	.	.	.	S	V	S	L	T	L	T	M	A	P	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	V	A	T	P	H	E	K	I	V	H	I	L	S	N	A	V	G	E	I	H	M	K	T	M	P	A
Template Known Secondary structure		.	.	G	G	S											T
Template Predicted Secondary structure		.	.
Template SS confidence
				133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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