Job Description P45421 Confidence 4.86% Date Thu Jan 5 12:02:34 GMT 2012 Rank 69 Aligned Residues 47 % Identity 23% Template c1obyB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. Resolution 1.85 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	N	N	G	F	G	F	G	P	N	G	S	L	N	L	I	A	S	D	A	F	S	G	S	N	N	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V	I	D	S	G	K	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.											.						.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.											.						.	.	.
Template Sequence		D	S	T	G	H	V	G	F	I	F	K	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S	I	V	.	K	D	S	S	A	A	R	N	G	.	.	.	.	.	L	L	T	E	H	N	I	C	E	I	.	N	G	Q	N	V	.	.	.	I	G	L	K
Template Known Secondary structure			T	T	S			S					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	T	T	S						T	.	.	.	.	.			S	S							.	T	T				.	.	.	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.											.						.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.																.	.	220	.	.		.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.		.	.	.	.	.				.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions