Job Description P45421 Confidence 29.65% Date Thu Jan 5 12:02:34 GMT 2012 Rank 19 Aligned Residues 67 % Identity 28% Template c1nteA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:syntenin 1; PDBTitle: crystal structure analysis of the second pdz domain of2 syntenin Resolution 1.24 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	A	H	I	R	V	Q	L	N	T	A	N	I	S	N	N	G	F	G	F	G	P	N	G	S	L	N	L	I	A	S	D	A	F	S	G	S	N	N	L	D	L	A	L	A	S	G	K	N	D	N	P	G	S	T	G	T	A	S	I	S	T	S	P	N	N	W	L	V	F	M	Q	N	G	Q	E	V	V	I
Query Conservation
Alig confidence										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.						.	.
Template Conservation										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.						.	.
Template Sequence		D	P	R	T	I	T	M	H	.	.	.	.	K	D	S	T	G	H	V	G	F	I	F	K	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S	I	V	.	.	.	.	.	.	K	D	S	S	A	A	R	N	G	L	L	T	E	H	N	I	C	E	I	.	N	G	Q	N	V	.	.
Template Known Secondary structure		S								.	.	.	.			T	T	S			S					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	T	T	S						T			T	T							.	T	T				.	.
Template Predicted Secondary structure										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																				.						.	.
Template SS confidence
		195	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																.	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.
		143	.	.	.	.													.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	V	S	L	T	L	T	M	A	P	A	F
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	I	G	L	K	D	S	Q	I	A	D	I	L	S	T	S	G	T	V	V	T	I	T	I	M	P	A	F
Template Known Secondary structure		.	T	T													S		S
Template Predicted Secondary structure		.
Template SS confidence
			247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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