Job Description P25745 Confidence 99.88% Date Thu Jan 5 11:42:33 GMT 2012 Rank 26 Aligned Residues 162 % Identity 22% Template c3p52B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni2 nctc 11168 in complex with the nitrate ion Resolution 2.74 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		M	S	E	T	A	K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	.	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W
Query Conservation																														.
Alig confidence																														.										.	.	.	.	.	.	.	.																																		.
Template Conservation																																								.	.	.	.	.	.	.	.																																		.
Template Sequence		K	N	S	Q	S	Q	G	V	V	L	G	L	S	G	G	I	D	S	A	L	V	A	T	L	C	K	R	A	L	K	E	N	V	F	A	L	L	X	.	.	.	.	.	.	.	.	P	T	Q	I	S	N	K	A	N	L	E	D	A	L	R	L	C	A	D	L	N	L	E	Y	K	I	I	E	I	Q	S	I	L	.
Template Known Secondary structure			T	S	S		S								S	S															T	T								.	.	.	.	.	.	.	.		S			S	S															T													.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																																		.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	F	E	L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	D	Q	S	Y	F	L	Y	T	L	S
Query Conservation
Alig confidence		.	.	.	.																				.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																				.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	A	F	I	K	Q	S	E	N	T	T	L	V	S	L	G	N	F	A	.	A	R	I	R	X	S	L	L	Y	D	Y	.	S	A	L	K	N	S	L	V	I	G	T	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	E	L	L	L	G	Y	G	T	I
Template Known Secondary structure		.	.	.	.					T	T		S												.												.				T	T				B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T		S		T
Template Predicted Secondary structure		.	.	.	.																				.												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.																					.	.	.	.	.	.	.	140	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		H	E	Q	I	A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V	.	.	T	A	K	K	K	D	S	T	G
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		Y	G	D	L	A	C	A	F	N	P	I	G	S	L	Y	K	S	E	I	Y	A	L	A	K	Y	L	N	L	H	E	N	F	I	K	K	G	F	S	Y	T
Template Known Secondary structure		T	T	T	T			S	B		T	T	T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions