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Job DescriptionP25745
Confidence81.71%DateThu Jan 5 11:42:33 GMT 2012
Rank73Aligned Residues109
% Identity17%Templatec3mmpC_
PDB info PDB header:transferaseChain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270.........280.........290......... 300.........310......
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Query Sequence  GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP. . . . FTGTMRCTVKTRYRQTD
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Template Sequence  GENVGVLLRGIK. . . . . R. . . . . EEIERGQVLAKPGT. . . . IKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTD
Template Known Secondary structure  T
SS

.....G.....GG

TT

TTS....



TTTTS
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B
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TT
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   1271........1280.. . ......1290....... ..1300.........1310.........1320.........1330......
 
   317..320........ .330.........340.........350.........360....
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Query Sequence  IPCTVKALDDDR. . . . . . . . . IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL
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Template Sequence  VTGTIELPEGVEMVMPGDNIKMVVTLIHPI. AMDDGLRFAIREGGRTVGAGVVAKVL
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   1337..1340.........1350.........1360...... ...1370.........1380.........1390..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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