Job Description P25745 Confidence 63.90% Date Thu Jan 5 11:42:33 GMT 2012 Rank 95 Aligned Residues 111 % Identity 12% Template c3mcaA_ PDB info PDB header:translation regulation/hydrolase Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	R	K	G	L	G	I	G	G	T	K	E	G	T	E	E	P	W	Y	V	V	D	K	D	V	E	N	N	I	L	V	V	A	Q	G	H	E	H	P	R	L	M	S	V	G	L	I	A	Q	Q	L	H	W	V	D	R	E	P	F	T	G	T	M	R	C	T	V	K	T	R	Y	R	Q	T	D	I	P	C	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		G	D	T	V	T	L	Q	L	A	D	I	E	.	.	.	.	.	.	.	.	.	.	V	N	Q	L	R	P	G	D	I	L	S	N	Y	.	.	E	N	P	V	R	R	V	R	S	F	V	A	E	I	Q	T	F	D	I	H	G	P	I	L	S	G	S	T	L	V	L	H	L	G	R	T	V	T	S	V	S	L	K
Template Known Secondary structure		T								S	S	S		.	.	.	.	.	.	.	.	.	.	G	G	G			T	T						S	.	.	S	S						S										S		S	S				T	T								S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.											.	.	.	.	480	.	.	.	.	.	.	.	.			.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		321	.	.	.	.	.	.												.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		V	K	A	L	D	D	D	.	.	.	.	.	.	.	.	.	.	.	R	I	E	V	I	F	D	E	P	V	A	A	V	T	.	.	.	.	.	.	P	G	Q	S	A	V	F	Y	N	G	E	V	C	L	G	G	G	I	I	E	Q	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	T	V	N	N	K	R	S	R	H	I	A	S	R	K	R	A	L	V	R	I	S	F	L	D	G	L	F	P	L	C	L	A	E	E	C	P	A	L	G	R	F	I	L	R	R	S	G	D	T	V	A	A	G	I	V	K	E	L
Template Known Secondary structure					S	S	S	S			S				S	S										S	S	S							T	T	T											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions