Job Description P25745 Confidence 99.92% Date Thu Jan 5 11:42:33 GMT 2012 Rank 9 Aligned Residues 188 % Identity 18% Template c3k32D_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized protein mj0690; PDBTitle: the crystal structure of predicted subunit of trna2 methyltransferase from methanocaldococcus jannaschii dsm Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W	D	N	V	F	E	L	F	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	V	L	F	S	G	G	K	D	S	S	L	S	A	V	I	L	K	K	L	G	Y	N	P	H	L	I	T	I	N	F	G	V	I	P	S	.	.	.	.	.	.	.	.	.	.	Y	K	L	A	E	E	T	A	K	I	L	G	F	K	H	K	V	I	T	L	D	R	K	I	V	E	K	A	A	D	X	I	I
Template Known Secondary structure								S	S													T	T											S	S	S		T	.	.	.	.	.	.	.	.	.	.	T											T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	D	Q	S	Y	F	L	Y	T	L	S	H	E	Q	I	A	Q	S	L
Query Conservation
Alig confidence					.	.	.	.	.	.							.													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.							.													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	K	.	.	.	.	.	.	Y	P	G	P	A	I	.	Q	Y	V	H	K	T	V	L	E	I	L	A	.	.	.	D	E	Y	S	I	L	A	D	G	T	R	R	D	D	R	V	P	K	L	S	Y	S	E	I	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	X	R	K	N	I	Q	Y	I
Template Known Secondary structure				S	.	.	.	.	.	.	S	S					.												T	.	.	.	T	T		S								T	T			S	S										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.							.													.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.							.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.														.	.	.	.	.	.	.	130	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V	T	A	K	K	K	D	S	T	G	I	C	F	I	G	E	R	K	F	R	E	F	L	G	R	Y	L	P	A	Q	P	G	K	I	I	T	.	V	D	G	D	E	I	G	E	H	Q	G	L
Query Conservation																																																										.
Alig confidence																														.	.	.	.	.	.	.																						.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		T	P	L	X	G	F	G	Y	K	T	L	R	H	L	A	S	E	F	F	I	L	E	E	I	S	S	D	Y	.	.	.	.	.	.	.	E	A	E	I	R	H	I	L	K	E	R	G	E	S	P	E	K	Y	F	P	E	H	K	Q	T	R	V	V	G	L	K	K	E	I
Template Known Secondary structure			G	G	G	G																					T	T	T	.	.	.	.	.	.	.												T			G	G	G	T													S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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