Job Description P25745 Confidence 23.39% Date Thu Jan 5 11:42:33 GMT 2012 Rank 225 Aligned Residues 91 % Identity 13% Template c3izq1_ PDB info PDB header:ribosomal protein,hydrolase Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome Resolution 9.50 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.																						.	.	.	.	.	330
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	A	Q	G	H	E	H	P	R	L	M	S	V	G	L	I	A	Q	Q	L	H	W	V	D	R	E	P	F	T	G	T	M	R	C	T	V	K	T	R	Y	R	Q	T	D	I	P	C	T	V	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	R	I	E
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.						.
Template Sequence		L	A	A	S	V	D	Y	S	S	I	H	S	A	Q	C	F	V	L	E	.	L	T	T	F	D	.	M	N	R	P	L	L	P	G	T	P	F	I	L	F	I	G	V	K	E	Q	P	A	R	I	K	R	L	I	S	F	I	D	K	G	N	T	A	S	K	K	K	I	R	H	L	G	S	K	Q	R	A	F	V	E
Template Known Secondary structure				B		S	T	T		S				B	S						.					S	.		S	S		B		T	T							S	S	S													S	S	S	S				B		T	T		S		S	S	S	S			S
Template Predicted Secondary structure																					.						.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.			.	.	.							.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure													.	.				.	.	.	.	.	.
Query SS confidence													.	.				.	.	.	.	.	.
Query Sequence		V	I	F	D	E	P	V	A	A	V	T	.	.	P	G	Q	.	.	.	.	.	.	S	A	V	F	Y	N	G	E	V	C	L	G	G	G	I	I	E	Q	R	L
Query Conservation													.	.				.	.	.	.	.	.
Alig confidence													.	.				.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	L	I	E	V	K	R	W	I	P	L	L	T	A	H	E	N	D	R	L	G	R	V	V	L	R	K	D	G	R	T	I	A	A	G	K	I	S	E	I	T
Template Known Secondary structure					S	S		S	S		B					T	T	T											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions