Return to main results Retrieve Phyre Job Id

Job DescriptionP25745
Confidence67.80%DateThu Jan 5 11:42:33 GMT 2012
Rank88Aligned Residues33
% Identity24%Templatec3g5jA_
PDB info PDB header:nucleotide binding proteinChain: A: PDB Molecule:putative atp/gtp binding protein; PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10... ......20.........30.....
Predicted Secondary structure 




.





Query SS confidence 










.





















Query Sequence  ETAKKVIVGMS. GGVDSSVSAWLLQQQGYQVEGL
Query Conservation 
   






.








 

   
 

 

Alig confidence 










.





















Template Conservation        

     
 

  
   
   
  
  
Template Sequence  LNYDNIVIYCARGGXRSGSIVNLLSSLGVNVYQL
Template Known Secondary structure  TT
S
SSSSTT


Template Predicted Secondary structure 









Template SS confidence 

































   84.....90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions