Job Description P25745 Confidence 99.33% Date Thu Jan 5 11:42:33 GMT 2012 Rank 42 Aligned Residues 144 % Identity 16% Template c3dlaD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don Resolution 2.35 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.				.
Query SS confidence																									.	.	.	.	.	.				.
Query Sequence		K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	.	.	.	.	.	.	G	Y	Q	.	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y
Query Conservation																									.	.	.	.	.	.				.
Alig confidence																									.	.	.	.	.	.				.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	V	V	I	G	V	S	G	G	L	D	S	T	H	A	L	I	V	A	T	H	A	M	D	R	E	G	R	P	R	S	D	I	L	A	F	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	N	N	A	I	K	L	A	R	A	L	G	V	T	F	S	E	I	D	I	G	D	T	A
Template Known Secondary structure										S	S																	T	T			G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T								T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400																.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		W	D	N	V	F	E	L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	.	.	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	D	Q	S	Y	F	L	Y
Query Conservation																											.	.
Alig confidence					.																						.	.											.														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																		.														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	M	.	L	H	T	I	G	H	P	Y	S	V	G	E	K	V	Y	D	V	T	F	E	N	V	Q	A	G	L	R	T	D	Y	L	F	R	.	I	A	N	Q	R	G	G	I	V	L	G	T	G	.	.	.	.	.	.	.	.	.	D	L	S	E	L	A	L	G	.	.	.	.	.	.	.	.	.	.	W	S
Template Known Secondary structure					.				T	T		G	G	G	G	T																							.						T								.	.	.	.	.	.	.	.	.								T	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure					.																																		.														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		433	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480	.										.	.	.	.	.	.	.	.											490	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	H	E	Q	I	A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	G	V	G	D	Q	M	S	H	Y	N	V	N	A	G	V	P	K	T	L	I	Q	H	L	I	R	W	V
Template Known Secondary structure				S	S	S	T	T			S			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions