Job Description P25745 Confidence 75.01% Date Thu Jan 5 11:42:33 GMT 2012 Rank 79 Aligned Residues 111 % Identity 15% Template c3agqA_ PDB info PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii Resolution 3.22 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		G	Q	R	K	G	L	G	I	G	G	T	K	E	G	T	E	E	P	W	Y	V	V	D	K	D	V	E	N	N	I	L	V	V	A	Q	G	H	E	H	P	R	L	M	S	V	G	L	I	A	Q	Q	L	H	W	V	D	R	E	P	.	.	.	.	F	T	G	T	M	R	C	T	V	K	T	R	Y	R	Q	T	D
Query Conservation																																																													.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.			.																		.	.	.	.																			.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.			.																		.	.	.	.
Template Sequence		G	E	N	V	G	V	L	L	.	.	.	.	.	.	.	.	.	R	G	.	I	K	R	E	E	I	E	R	G	Q	V	L	A	K	P	G	T	.	.	.	.	I	K	P	H	T	K	F	E	S	E	V	Y	I	L	S	K	D	E	G	G	R	H	T	P	F	F	K	G	Y	R	P	Q	F	Y	F	R	T	T	D
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.		S	.			T	T	S			T	T						T	T	S	.	.	.	.																T	T	T	T	S		S	S		B		T	T								S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.			.																		.	.	.	.
Template SS confidence
		556	.	.	.	560	.	.	.										.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.					.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
		317	.	.	320	.	.	.	.	.	.	.	.										.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.
Query Sequence		I	P	C	T	V	K	A	L	D	D	D	R	.	.	.	.	.	.	.	.	.	I	E	V	I	F	D	E	P	V	A	A	V	T	P	G	Q	S	A	V	F	Y	N	G	E	V	C	L	G	G	G	I	I	E	Q	R	L	P	L
Query Conservation														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.											.
Template Conservation																																	.
Template Sequence		V	T	G	T	I	E	L	P	E	G	V	E	M	V	M	P	G	D	N	I	K	M	V	V	T	L	I	H	P	I	A	.	M	D	D	G	L	R	F	A	I	R	E	G	G	R	T	V	G	A	G	V	V	A	K	V	L	S	G
Template Known Secondary structure			B							S	S				B		T	T															.			T	T								T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions