Job Description P25745 Confidence 99.97% Date Thu Jan 5 11:42:33 GMT 2012 Rank 3 Aligned Residues 180 % Identity 21% Template c2vxoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: human gmp synthetase in complex with xmp Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		T	A	K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	G	Y	Q	.	.	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W	D	N
Query Conservation																														.	.
Alig confidence																														.	.							.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		G	T	S	K	V	L	V	L	L	S	G	G	V	D	S	T	V	C	T	A	L	L	N	R	A	L	N	Q	E	Q	V	I	A	V	H	I	.	.	.	.	.	.	.	.	D	N	G	F	M	R	K	R	E	S	Q	S	V	E	E	A	L	K	K	L	G	I	Q	V	K	V	I	N	A	A	H	S	F	Y	N	G
Template Known Secondary structure		T	T									S	S														S		T	T	T							.	.	.	.	.	.	.	.			S				T	T	T	T	T									T	T														T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.
Predicted Secondary structure																				.	.	.	.												.																																								.	.	.
Query SS confidence																				.	.	.	.												.																																								.	.	.
Query Sequence		V	F	E	L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	.	.	.	.	I	L	C	N	K	E	I	K	F	K	A	.	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	.	.	.	D	Q	S	Y
Query Conservation																				.	.	.	.												.																																								.	.	.
Alig confidence																				.	.	.	.												.																																								.	.	.
Template Conservation
Template Sequence		T	T	T	L	P	R	I	S	K	T	L	N	M	T	T	S	P	E	E	K	R	K	I	I	G	D	T	F	V	K	I	A	N	E	V	I	G	E	M	N	L	K	P	E	E	V	F	L	A	Q	G	T	L	R	P	D	L	I	E	S	A	S	L	V	A	S	G	K	A	E	L	I	K	T	H	H	N	D	T	E
Template Known Secondary structure				B				B				G	G	G																										T	T			G	G	G								S	S			S	S									S				G	G	G	S			S	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		F	L	Y	T	L	S	H	E	Q	I	A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V	.	.	.	T	A	K	K	K
Query Conservation																																					.	.	.
Alig confidence										.	.																										.	.	.
Template Conservation										.	.
Template Sequence		L	I	R	K	L	R	E	E	.	.	G	K	V	I	E	P	L	K	D	F	H	K	D	E	V	R	I	L	G	R	E	L	G	L	P	E	E	L	V	S	R	H	P
Template Known Secondary structure									T	.	.	T					G	G	G	G	S												T	T							T
Template Predicted Secondary structure										.	.
Template SS confidence
		397	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions