Job Description P25745 Confidence 21.18% Date Thu Jan 5 11:42:33 GMT 2012 Rank 252 Aligned Residues 82 % Identity 12% Template c2l1tA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of the n-terminal domain of np_954075.1 Resolution UNK

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	T	L	G	Q	R	K	G	L	G	I	G	G	T	K	E	G	T	E	E	P	W	Y	V	V	D	K	D	V	E	N	N	I	L	V	V	A	Q	G	H	E	H	P	R	L	M	S	V	G	L	I	A	Q	Q	L	H	W	V	D	R	E	P	F	T	G	T	M	R	C	T	V	K	T	R	Y	R	Q	T	D
Query Conservation
Alig confidence																														.										.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																														.										.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		Y	F	E	Q	L	Q	K	V	N	L	T	V	R	L	G	D	T	G	S	F	D	G	T	A	A	I	T	S	.	L	K	G	S	L	A	W	L	E	.	.	.	.	.	.	.	L	F	G	A	E	Q	P	P	.	.	.	.	.	.	.	P	N	T	L	S	E	G	A	E	V	S	V	S	V	W	T	G	G	A	L
Template Known Secondary structure		T			T	T										T	T	T												.			T	T						.	.	.	.	.	.	.		S	S	S					.	.	.	.	.	.	.	T	T	T			T	T										T	T
Template Predicted Secondary structure																														.										.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		I	P	C	T	V	K	A	L	D	.	.	.	D	D	R	I	E	V	I	F
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		C	R	C	D	G	R	V	E	T	L	R	D	D	R	Q	F	A	I	R	L
Template Known Secondary structure										S	B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions