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Job Description | P25745 | Confidence | 35.36% | Date | Thu Jan 5 11:42:33 GMT 2012 |
Rank | 148 | Aligned Residues | 77 |
% Identity | 14% | Template | c2iy3A_ |
PDB info |
PDB header:rna-binding | Chain: A: PDB Molecule:signal recognition particle protein ffh; |
PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
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Resolution | 16.00 Å |
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Query Sequence |   |
V | I | V | G | M | S | G | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | L | V | G | L | Q | G | S | G | K | T | T | T | A | A | K | L | A | L | Y | Y | K | G | K | G | R | R | P | L | L | V | A | A | D | T | . |
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Q | R | P | A | A | R | E | Q | L | R | L | L | G | E | K | V | G | V | P | V | L | E | V | M | D | G | E | S | P | E | S | I | R | R | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
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. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
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85 | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | F | L | A | E | Y | K | A | G | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | E | E | K | A | R | L | E | A | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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172 | . | . | . | . | . | . | . | 180 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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