Return to main results Retrieve Phyre Job Id

Job DescriptionP25745
Confidence35.36%DateThu Jan 5 11:42:33 GMT 2012
Rank148Aligned Residues77
% Identity14%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.... .....20 .........30.........40.........50.........60.........70.........80....
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Query Sequence  VIVGMSG. GVDSSV. . SAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFE
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Template Sequence  FLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADT. . . . . . . . . . QRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRR
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TTSSTT



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TT

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   102.......110.........120.........130...... ...140.........150.........160.........170.
 
   85....90....
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Query Sequence  LFLAEYKAGR
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Template Sequence  VEEKARLEAR
Template Known Secondary structure  T
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   172.......180.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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