Job Description P25745 Confidence 29.99% Date Thu Jan 5 11:42:33 GMT 2012 Rank 182 Aligned Residues 103 % Identity 14% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	R	K	G	L	G	I	G	G	T	K	E	G	T	E	E	P	W	Y	V	V	D	K	D	V	E	N	N	I	L	V	V	A	Q	G	H	E	H	P	R	L	M	S	V	G	L	I	A	Q	Q	L	H	W	V	D	R	E	P	F	T	G	T	M	R	C	T	V	K	T	R	Y	R	Q	T	D	I	P	C	T
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.																													.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.																													.	.
Template Sequence		G	T	R	V	G	X	R	L	.	.	.	.	.	.	.	.	.	.	K	N	V	Q	A	K	D	I	E	R	G	F	I	I	S	D	K	E	I	.	.	.	.	.	V	T	T	D	Y	T	L	E	C	T	V	S	K	F	T	K	K	I	E	P	A	S	V	L	H	L	F	V	.	.	G	L	Q	S	E	P	V	R
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.	.		S			G	G	G			T	T					S				.	.	.	.	.													T	T	S			B		T	T								.	.	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.																													.	.
Template SS confidence
		232	.	.	.	.	.	.	.											240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.
		321	.	.	.	.	.	.														.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		V	K	A	L	D	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	E	V	I	F	D	E	P	V	A	A	V	T	P	G	Q	S	A	V	F	Y	N	G	E	.	.	.	V	C	L	G	G	G	I	I	E
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.											.															.	.	.
Template Conservation																																.
Template Sequence		V	E	K	I	L	V	D	G	N	E	V	E	E	A	K	P	G	S	T	C	V	L	E	L	S	G	N	K	K	L	.	A	Y	S	K	Q	D	R	F	L	L	A	N	L	D	L	T	Q	R	F	A	A	Y	G	F	S	K
Template Known Secondary structure								T	T				S		B		T	T														.				T	T	S							T	T	S	S	S
Template Predicted Secondary structure																																.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions