Job Description P25745 Confidence 99.88% Date Thu Jan 5 11:42:33 GMT 2012 Rank 24 Aligned Residues 180 % Identity 29% Template c2e18B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of project ph0182 from pyrococcus horikoshii ot3 Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		A	K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	.	.	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W	D	N	V
Query Conservation																										.	.
Alig confidence																										.	.										.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		N	N	G	V	V	I	G	I	S	G	G	V	D	S	A	T	V	A	Y	L	A	T	K	A	L	G	K	E	K	V	L	G	L	I	M	.	.	.	.	.	.	.	.	.	.	P	Y	F	E	N	K	D	V	E	D	A	K	L	V	A	E	K	L	G	I	G	Y	K	V	I	N	I	K	P	I	V	.	.	.	.
Template Known Secondary structure		T	T								S	S																G	G	G							.	.	.	.	.	.	.	.	.	.		S	S		S														T													.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	D	Q	S	Y	F	L	Y	T	L	S	H	E	Q
Query Conservation
Alig confidence		.																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	D	S	F	V	E	N	L	E	L	N	L	D	R	K	G	L	G	N	I	M	S	R	T	R	M	I	M	L	Y	A	H	.	A	N	S	L	G	R	I	V	L	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	S	E	F	L	T	G	Y	F	T	K	W	G	D
Template Known Secondary structure		.									S																							.					T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T		S		T	T	T	T
Template Predicted Secondary structure		.																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130																					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																												.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.													.	.	.	.	.	.	.	.	.
Query Sequence		I	A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V	.	.	T	A	K	K	K	D	S	T	G	I	C	F	.	.	.	.	.	.	.	.	.	I	G	E	R	K	F	R	E	F	L	G	R	Y	L	P	A	Q	P	G	K
Query Conservation																												.	.													.	.	.	.	.	.	.	.	.
Alig confidence																												.	.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	S	D	Y	A	P	I	I	N	L	Y	K	T	E	V	W	E	I	A	K	R	I	G	V	P	E	R	I	V	K	K	K	P	S	A	G	L	W	E	G	Q	T	D	E	D	E	L	G	I	S	Y	N	L	L	D	E	I	L	W	R	M	I	D	L	K	I	G	K
Template Known Secondary structure		T		S	S	B		T	T	T	T	S												T	T								S						S	S	T	T								T	S														T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions