Job Description P25745 Confidence 64.86% Date Thu Jan 5 11:42:33 GMT 2012 Rank 94 Aligned Residues 149 % Identity 17% Template c2dzdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50														.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	T	A	K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	.	S	A	W	L	L	Q	Q	Q	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I
Query Conservation																					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.					.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		T	R	R	I	R	K	V	L	V	A	N	R	G	.	.	E	I	A	I	R	V	F	R	A	C	T	E	L	G	I	R	T	V	A	I	Y	S	K	E	D	V	G	S	Y	H	R	Y	K	A	D	E	A	Y	L	V	G	E	G	K	K	P	I	E	A	Y	L	D	I	E	G	I	I	E	I	A	K	A	H	D	V
Template Known Secondary structure						S									.	.													T	T									G	G	G	G	G		G	G	G	G	G	S	S						S	T	T	S						T	T												T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		E	L	H	T	V	N	F	A	A	E	Y	W	D	N	V	F	E	L	F	L	A	E	Y	K	A	G	R	T	P	.	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D
Query Conservation																															.
Alig confidence						.	.																								.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	I	H	.	.	P	G	Y	G	F	L	S	E	N	I	Q	F	A	K	R	C	R	E	E	G	I	I	F	I	G	P	N	E	N	H	L	D	M	F	G	D	K	V	K	A	R	H	A	A	V	N	A	G	I	P	V	I	P	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						.	.			S	S	S	S	T	T											T	T				S	S										T	S										T	T	T			B			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	K	D	Q	S	Y	F	L	Y	T	L	S	H	E	Q	I	A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V	T	A	K	K	K	D	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	P	V	D	G	L	E	D	V	V	A	F	A	E	A	H	G	Y	P	I	I	I	K	A	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S	S													S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions