Job Description P25745 Confidence 99.38% Date Thu Jan 5 11:42:33 GMT 2012 Rank 40 Aligned Residues 128 % Identity 19% Template c1vbkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W	D	N	V	F
Query Conservation
Alig confidence															.																							.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																							.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	G	R	M	I	G	I	L	H	D	E	L	.	S	A	L	A	I	F	L	M	M	K	R	G	V	E	V	I	P	V	Y	I	G	K	.	.	.	.	.	.	.	.	.	.	.	D	D	K	N	L	E	K	V	R	S	L	W	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T								S	S			.											B	T									S		.	.	.	.	.	.	.	.	.	.	.	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																							.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.												.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		E	L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	.	.	R	G	L	D	S	N	K	D	Q	S	Y	F	L	Y	T	L	S	H	E
Query Conservation																																																													.	.
Alig confidence		.	.	.	.	.	.	.																						.	.																														.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																						.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	R	Y	S	Y	G	S	K	G	F	L	V	V	A	E	S	F	D	R	V	L	.	.	K	L	I	R	D	F	G	V	K	G	V	I	K	G	L	R	P	N	D	L	N	S	E	V	S	E	I	T	E	D	F	K	M	F	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.		T	T		T	T	S								S	S						.	.							T										G	G	G			T	T												S	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	V	Y	Y	P	L	I	A	L	P	E	E	Y	I	K	S	V	K	E	R	L	G	L
Template Known Secondary structure		.	.	.	.								S													T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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