Job Description P25745 Confidence 32.04% Date Thu Jan 5 11:42:33 GMT 2012 Rank 166 Aligned Residues 96 % Identity 16% Template c1r5nA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp- PDBTitle: crystal structure analysis of sup35 complexed with gdp Resolution 2.90 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	V	E	N	N	I	L	V	V	A	Q	G	H	E	H	P	R	L	M	S	V	G	L	I	A	Q	Q	L	H	W	V	D	R	E	P	F	T	G	T	M	R	C	T	V	K	T	R	Y	R	Q	T	D	I	P	C	T	V	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																.
Template Sequence		S	D	V	Q	T	G	Y	V	L	T	S	T	K	N	P	.	.	.	V	H	A	T	T	R	F	I	A	Q	I	A	I	L	E	.	L	P	S	I	L	T	T	G	Y	S	C	V	M	H	I	H	T	A	V	E	E	V	S	F	A	K	L	L	H	K	L	D	K	T	N	R	K	S	K	K	P	P	M	F	A	T
Template Known Secondary structure		S	S			T	T						S	S	S		.	.	.														S	S	.					B	S	S								S	S	S																S	S					S	S			S	B
Template Predicted Secondary structure																	.	.	.																.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.				.	.	.	.	.	.	560	.	.	.	.	.	.	.	.		.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
				325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.							.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure		.	.																					.	.	.	.	.	.
Query SS confidence		.	.																					.	.	.	.	.	.
Query Sequence		.	.	D	D	D	R	I	E	V	I	F	D	E	P	V	A	A	V	T	P	G	Q	.	.	.	.	.	.	S	A	V	F	Y	N	G	E	V	C	L	G	G	G	I	I	E	Q	R	L
Query Conservation		.	.																					.	.	.	.	.	.
Alig confidence		.	.														.							.	.	.	.	.	.
Template Conservation																	.
Template Sequence		K	G	M	K	I	I	A	E	L	E	T	Q	T	P	V	.	C	M	E	R	F	E	D	Y	Q	Y	M	G	R	F	T	L	R	D	Q	G	T	T	V	A	V	G	K	V	V	K	I	L
Template Known Secondary structure		T	T														.					T	T	T		G	G	G	G							T	T
Template Predicted Secondary structure																	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions