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Job DescriptionP25745
Confidence99.90%DateThu Jan 5 11:42:33 GMT 2012
Rank17Aligned Residues148
% Identity28%Templatec1gpmD_
PDB info PDB header:transferase (glutamine amidotransferase)Chain: D: PDB Molecule:gmp synthetase; PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20........ .30.........40.........50.........60.........70.........80...
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Query Sequence  AKKVIVGMSGGVDSSVSAWLLQQQ. GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVF
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Template Sequence  DDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRL. . . . . . . NEAEQVLDMFGDHFGLNIVHVPAEDRFLSAL.
Template Known Secondary structure  T


SSGGG
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T.......TTTT


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   227..230.........240.........250.........260....... ..270.........280.........290........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  ELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQI
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Template Sequence  . . . . . AGENDPEAKRKIIGRVFVEV. . FDEEALKLEDVKWLAQGTIYPDVIEMK. . . . . . . . . . . . . . . . . . . . . . . . . .
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   299300.........310........ .320.........330.........340.....
 
   164.....170.........180........ .190...
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Query Sequence  AQSLFPVGELEKPQVRKIAEDLGLV. . . TAKKK
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Template Sequence  MGLVEPLKELFKDEVRKIGLELGLPYDMLYRHP
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TTTT

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   370.........380.........390.........400..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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