Job Description Q46891 Confidence 100.00% Date Thu Jan 5 12:35:33 GMT 2012 Rank 19 Aligned Residues 236 % Identity 16% Template d2q02a1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like IolI-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		P	R	F	A	A	N	L	S	M	M	F	T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	.	.	.	.	.	.	.	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence								.																														.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation								.																																																																					.	.	.	.	.
Template Sequence		T	R	F	C	I	N	.	R	K	I	A	P	G	L	S	I	E	A	F	F	R	L	V	K	R	L	E	F	N	K	V	E	L	R	N	D	X	P	S	G	S	V	T	D	D	L	N	Y	N	Q	V	R	N	L	A	E	K	Y	G	L	E	I	V	T	I	N	A	V	Y	P	F	N	Q	L	T	.	.	.	.	.
Template Known Secondary structure		G	G					.	G	G	G		T	T	S												T	T								T	T	S	T	T	S	S	T	T	T	T													T	T										T	T	T	T	S			.	.	.	.	.
Template Predicted Secondary structure								.																																																																					.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L
Query Conservation
Alig confidence		.	.	.	.	.	.																																			.	.	.	.																															.	.	.
Template Conservation		.	.	.	.	.	.																																			.	.	.	.																															.	.	.
Template Sequence		.	.	.	.	.	.	E	E	V	V	K	K	T	E	G	L	L	R	D	A	Q	G	V	G	A	R	A	L	V	L	C	P	L	N	D	G	T	I	V	P	.	.	.	.	P	E	V	T	V	E	A	I	K	R	L	S	D	L	F	A	R	Y	D	I	Q	G	L	V	E	P	L	G	F	R	.	.	.	V	S	S
Template Known Secondary structure		.	.	.	.	.	.																		T		S									S	S					.	.	.	.																	T	T	T										S	T	.	.	.	T		S
Template Predicted Secondary structure		.	.	.	.	.	.																																			.	.	.	.																															.	.	.
Template SS confidence
								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.												210	.	.	.	.	.	.	.	.	.		220	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G	L	P	.	.	.	.	.	.	.	.	.	.	.	D	R	H	E	P	D	D	G	E	I	.	N	Y	P
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		L	R	S	A	V	W	A	Q	Q	L	I	R	E	A	G	S	P	F	K	V	L	L	D	T	F	H	H	H	L	Y	E	E	A	E	K	E	F	A	S	R	I	D	I	S	A	I	G	L	V	H	L	S	G	V	E	D	T	R	P	T	E	A	L	A	D	E	Q	R	I	X	L	S	E	K	D	V	X	Q	N	Y
Template Known Secondary structure																T																T	T											G	G	G								B					S		G	G	G			G	G	G		B				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.												.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	F	R	L	F	D	E	V	G	Y	Q	G	W	I	G	C	E	Y	K	P	R	G	.	.	.	.	.	.	.	.	.	.	.	L	T	E	E	G	L	G	W	F	D	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	V	Q	R	L	E	N	X	G	Y	R	G	I	Y	A	F	E	P	F	S	S	Q	L	A	S	W	S	E	A	E	I	E	E	Q	I	N	R	S	V	S	L	L	L	Q
Template Known Secondary structure										T	T			S									G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions