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Job DescriptionQ46891
Confidence30.30%DateThu Jan 5 12:35:33 GMT 2012
Rank216Aligned Residues134
% Identity13%Templated2pb1a1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110......
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Query Sequence  LQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAE. . . . . .
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Template Sequence  EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYV. . . . . QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRD
Template Known Secondary structure  TT

GGGT


TT



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TT

TT
SS

GGGSSTT
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   77..80.........90.........100......... 110.........120.........130.........140.........150.
 
   117..120.........130....... ..140.........150... ......160.........170.........180.
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Query Sequence  . . . . . . . RYRAVFIDNIRYAADRFAPHG. . . KRILVEALSPGVKPHY. . . . LFSSQYQALAIVEEVARDNVFIQLDTFH
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Template Sequence  SYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQ
Template Known Secondary structure 


TTSTTSSGGGTTTS
S


GGGS
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TT
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   152.......160.........170.........180.........190.........200.........210.........220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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