Job Description Q46891 Confidence 100.00% Date Thu Jan 5 12:35:33 GMT 2012 Rank 23 Aligned Residues 245 % Identity 14% Template d1xp3a1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like Endonuclease IV Resolution 2.57

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40											.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	A	A	N	L	S	M	M	F	T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	Y	N	Y	.	.	.	.	.	.	.	.	.	.	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence											.																													.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation											.																																																															.	.	.	.
Template Sequence		K	I	G	S	H	V	S	M	S	.	G	K	K	M	L	L	A	A	S	E	E	A	V	S	Y	G	A	T	T	F	M	I	Y	T	G	A	P	Q	N	T	R	R	K	P	I	E	E	L	N	I	E	A	G	R	K	H	M	E	Q	N	G	I	E	E	I	I	I	H	A	P	Y	I	.	.	.	.	I	N	V	G
Template Known Secondary structure						B					.	S	S	S	T										T	T	T		S	S					S	S		T	T							G	G	G	G												T	T										T	T	.	.	.	.			T	T
Template Predicted Secondary structure											.																																																															.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H
Query Conservation
Alig confidence																																																											.	.																			.	.
Template Conservation																																																											.	.																			.	.
Template Sequence		N	T	T	K	P	E	T	F	Q	L	G	V	D	F	L	R	M	E	I	E	R	T	S	A	L	G	V	A	K	Q	I	V	L	H	P	G	A	H	V	G	A	G	A	D	A	G	I	Q	Q	I	I	K	G	L	N	E	V	.	.	L	T	P	D	Q	T	V	N	I	A	L	E	T	M	A	G	K	G	.	.	T
Template Known Secondary structure				S																						S	S	S												T	T	S																	.	.			T	T		S	S											T	.	.	T
Template Predicted Secondary structure																																																											.	.																			.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.
Predicted Secondary structure																					.																										.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																					.																										.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	.	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	.	.	.	.	.	.	.	.	.	A	G	K	Y	A	H	V	Q	I	A	G	L	P	D	.	.	.	.	.	.	.	.	R	H	E	P
Query Conservation																					.																										.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence																					.																										.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	C	G	R	S	F	E	E	I	A	K	I	I	D	G	V	K	Y	N	E	K	L	S	V	C	F	D	T	C	H	T	H	D	A	G	Y	D	I	V	N	N	F	D	G	V	L	N	E	F	D	K	I	V	G	I	D	R	L	Q	V	L	H	I	N	D	S	K	N	V	R	G	A	G	K	D	R	H	E	N	I
Template Known Secondary structure						S												T	T	G	G	G													T	T																		T		G	G	G										S	S		T	T									T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																							.							.	.	.	.	.	.	.	.
Query SS confidence																							.							.	.	.	.	.	.	.	.
Query Sequence		D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q	G	.	W	I	G	C	E	Y	.	.	.	.	.	.	.	.	K	P	R	G	L	T	E	E	G	L	G	W	F	D	A
Query Conservation																							.							.	.	.	.	.	.	.	.
Alig confidence																							.							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	G	H	I	G	Y	K	A	L	H	H	I	V	H	H	P	Q	L	T	H	V	P	K	I	L	E	T	P	Y	V	G	E	D	K	K	D	K	K	P	P	Y	K	L	E	I	E	M	L	K	N
Template Known Secondary structure		T	S	S	S	S										T		G	G	G	T	T	S									B			S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions