Job Description Q46891 Confidence 99.95% Date Thu Jan 5 12:35:33 GMT 2012 Rank 35 Aligned Residues 248 % Identity 19% Template d1xlma_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.40

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		3	.	.	.	.	.	.	10	.	.														.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.							.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.							.	.	.	.	.	.	.
Query Sequence		R	F	A	A	N	L	S	M	M	F	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	.	.	.	.	F	P	Y	N	Y	S	.	.	.	.	.	.	.	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.							.	.	.	.	.	.	.
Alig confidence							.					.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.							.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		H	F	T	F	G	.	L	W	T	V	G	W	T	G	A	D	P	F	G	V	A	T	R	K	N	L	D	P	V	E	A	V	H	K	L	A	E	L	G	A	Y	G	I	T	F	H	D	N	D	L	I	P	F	D	A	T	E	A	E	R	E	K	I	L	G	D	F	N	Q	A	L	K	D	T	G	L	K	V	P	M
Template Known Secondary structure							.					T					B	T	T	B				S																T												S		T	T																					T
Template Predicted Secondary structure							.
Template SS confidence
		9	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																.	.																																						.	.	.	.
Query SS confidence																.	.																																						.	.	.	.
Query Sequence		F	N	T	A	P	G	D	I	N	A	G	E	W	G	.	.	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	.	.	.	.	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R
Query Conservation																.	.																																						.	.	.	.
Alig confidence																.	.																																						.	.	.	.
Template Conservation
Template Sequence		V	T	T	N	L	F	S	H	P	V	F	K	D	G	G	F	T	S	N	D	R	S	I	R	R	F	A	L	A	K	V	L	H	N	I	D	L	A	A	E	M	G	A	E	T	F	V	M	W	G	G	R	E	G	S	E	Y	D	G	S	K	D	L	A	A	A	L	D	R	M	R	E	G	V	D	T	A	A	G	Y
Template Known Secondary structure							S	S	S	G	G	G	T	T		S	T	T		S	S																						T		S							S	S	S			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		133	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																			.																					.	.
Query SS confidence							.	.																																			.																					.	.
Query Sequence		F	A	P	H	G	.	.	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	.	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	.	.	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G
Query Conservation							.	.																																			.																					.	.
Alig confidence							.	.																																			.																					.	.
Template Conservation
Template Sequence		I	K	D	K	G	Y	N	L	R	I	A	L	E	P	K	P	N	E	P	R	G	D	I	F	L	P	T	V	G	H	G	L	A	F	I	E	Q	L	E	H	G	D	I	V	G	L	N	P	E	T	G	H	E	Q	M	A	G	L	N	F	T	H	G	I	A	Q	A	L	W	A	E	K	L	F	H	I	D	L	N	G
Template Known Secondary structure						T		S									S		S	S	S	S			S	S		S									T	T		T	T	G	G	G						B						T	T	T													T	T		B							B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		208	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.
Predicted Secondary structure						.	.	.	.	.																			.	.	.	.	.	.	.															.
Query SS confidence						.	.	.	.	.																			.	.	.	.	.	.	.															.
Query Sequence		L	P	D	R	.	.	.	.	.	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	.	.	.	.	.	.	.	E	V	G	Y	Q	G	W	I	G	C	E	Y	K	P	.	R	G	L	T	E	E	G	L
Query Conservation						.	.	.	.	.																			.	.	.	.	.	.	.															.
Alig confidence						.	.	.	.	.																			.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		Q	R	G	I	K	Y	E	Q	E	L	V	F	G	H	G	D	L	T	S	A	F	F	T	V	D	L	L	E	N	G	F	P	N	G	G	P	K	Y	T	G	P	R	H	F	D	Y	K	P	S	R	T	D	G	Y	D	G	V
Template Known Secondary structure				S	S	S	S				B		T	T	S	S																	T	T							S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions