Job Description Q46891 Confidence 48.18% Date Thu Jan 5 12:35:33 GMT 2012 Rank 160 Aligned Residues 149 % Identity 11% Template d1vpqa_ SCOP info TIM beta/alpha-barrel TM1631-like TM1631-like Resolution 2.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.										.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.															.								.	.																			.
Query SS confidence															.	.	.	.	.	.	.	.	.															.								.	.																			.
Query Sequence		M	P	R	F	A	A	N	L	S	M	M	F	T	.	.	.	.	.	.	.	.	.	E	V	P	F	I	E	R	F	A	A	A	R	K	A	.	G	F	D	A	V	E	F	.	.	L	F	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	.	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N
Query Conservation															.	.	.	.	.	.	.	.	.															.								.	.																			.
Alig confidence									.						.	.	.	.	.	.	.	.	.															.								.	.																			.
Template Conservation									.
Template Sequence		M	V	Y	V	G	T	S	.	G	F	S	F	E	D	W	K	G	V	V	Y	P	E	H	L	K	P	S	Q	F	L	K	Y	Y	W	A	V	L	G	F	R	I	V	E	L	N	F	T	Y	Y	T	Q	P	S	W	R	S	F	V	Q	M	L	R	K	T	P	P	D	F	Y	F	T	V	K	T	P	G	S	V	T	H
Template Known Secondary structure								B	.		S			S	T	T	B	T	T	T	B		T	T			G	G	G								T	S											S	S	S	S	S										T	T	S		T	T
Template Predicted Secondary structure									.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P
Query Conservation
Alig confidence																											.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	W	K	E	G	K	D	P	K	E	D	M	E	N	F	T	R	Q	I	E	P	L	I	E	.	E	Q	R	L	K	M	T	L	A	Q	F	P	F	S	F	K	F	S	.	.	.	.	.	.	.	.	.	.	.	R	K	N	V	E	Y	L	E	K	L	R	E	S	Y	P	Y	E	L	A	V	E	F	R	H	Y
Template Known Secondary structure		T					T			S																	.	T	T											T	T					.	.	.	.	.	.	.	.	.	.	.																S								B	G
Template Predicted Secondary structure																											.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	W	D	R	E	E	T	Y	E	F	L	R	N	H	G
Template Known Secondary structure		G	.	.	.	.	.	.	.	G		S											T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		148								.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions