 |
Job Description | Q46891 | Confidence | 25.03% | Date | Thu Jan 5 12:35:33 GMT 2012 |
Rank | 250 | Aligned Residues | 98 |
% Identity | 11% | Template | d1r3sa_ |
SCOP info | TIM beta/alpha-barrel
| UROD/MetE-like
| Uroporphyrinogen decarboxylase, UROD
|
Resolution | 1.65 |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | A | A | R | K | A | G | F | D | A | V | E | F | L | F | P | Y | N | Y | S | T | L | Q | I | Q | K | Q | L | E | Q | N | H | L | T | L | A | L | F | N | T | A | P | G | D | I | N | A | G | E | W | G | L | S | A | L | P | G | R | E | H | E | A | H | A | D | I | D | L | A | L | E | Y | A | L | A | L | N | C | E |
Query Conservation |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . |   |   |   |
Template Sequence |   |
L | E | E | L | A | Q | A | G | Y | E | V | V | G | L | . |
. |
D | W | T | V | A | P | K | K | A | R | E | C | V | G | K | T | V | T | L | Q | G | N | L | D | P | C | A | L | Y | A | S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | I | G | Q | L | V | K | Q | M | L | D | D | F | . |
. |
. |
G | P | H |
Template Known Secondary structure |   |
 |  |  |  | T | T | S | S |
| S |  |  |  |
| . | . |
| T | T | S |
|  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |
| G | G | G | G | G | S |
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
|
. | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
|
|
. | 330 | . |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | H | V | M | A | G | V | V | P | A | G | E | D | A | E | R | Y | R | A | V | F | I | D | N | I | R | Y | A | A | D | R | F | A | P |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
R | Y | I | A | N | L | G | H | G | L | Y | P | D | M | D | P | E | H | V | G | A | F | V | D | A | V | H | K | H | S | R | L | L | R | Q |
Template Known Secondary structure |   |
S |  |  |  |  |  | S | S |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|