Return to main results Retrieve Phyre Job Id

Job DescriptionQ46891
Confidence82.99%DateThu Jan 5 12:35:33 GMT 2012
Rank81Aligned Residues204
% Identity15%Templated1h1ya_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution1.87

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30...... ...40.........50.........60.........70.....
Predicted Secondary structure 











.......






















Query SS confidence 

































. . . . . . .






































Query Sequence  RFAANLSMMFTEVPFIERFAAARKAGFDAVEFLF. . . . . . . PYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSA
Query Conservation    
   
       
 
 
  
   

  


  .......            
    
                     
Alig confidence 





.


























.......





























.........
Template Conservation 

 


.   
   
   
      
 
 


 
 

            
  
       
          .........
Template Sequence  KIAPSM. LSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPS. . . . . . . . .
Template Known Secondary structure  BG.GGS
GGGTT
SBSSSSS
B


TT

SSS
GG.........
Template Predicted Secondary structure  .






























.........
Template SS confidence 















































































   7..10.. .......20.........30.........40.........50.........60.........70......
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLF
Query Conservation                 
  
  

   
                       
      
   

 
 

            
Alig confidence  .............























.............

















.....






Template Conservation  .............  
      


 
 
        .............           
    
 .....    
  
Template Sequence  . . . . . . . . . . . . . DYVEPLAKAGASGFTFHIEVSRDN. . . . . . . . . . . . . WQELIQSIKAKGMRPGVS. . . . . LRPGTPV
Template Known Secondary structure  .............GGT
SGGG
TTT.............TT
.....
TTS
G
Template Predicted Secondary structure  .............








.............


.....





Template SS confidence 















































































   77..80.........90.........100 .........110........ .120.....
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SSQYQALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGEINYPWLFRLFDEVGYQG
Query Conservation          
             
  
    
            

  

  
       
 
 

   
   
   

 
Alig confidence 



















































........













.




Template Conservation                 
       
             
  
        
  ........ 


    
     . 


 
Template Sequence  EEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV. . . . . . . . DGGLGPSTIDVAAS. AGANC
Template Known Secondary structure  GGGSSS

SSS
TT
SS



GGG
TTS........SS
STTT.T

Template Predicted Secondary structure 



















........



.



Template SS confidence 















































































   126...130.........140.........150.........160.........170....... ..180.........190. .....
 
   236...240.........250......
Predicted Secondary structure  .



Query SS confidence  .




















Query Sequence  . WIGCEYKPRGLTEEGLGWFDA
Query Conservation  . 
  
  
       
     
Alig confidence  .




















Template Conservation 






    
       
  
Template Sequence  IVAGSSIFGAAEPGEVISALRK
Template Known Secondary structure  STSS
Template Predicted Secondary structure 



Template SS confidence 





















   197..200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions