Job Description Q46891 Confidence 100.00% Date Thu Jan 5 12:35:33 GMT 2012 Rank 26 Aligned Residues 249 % Identity 18% Template d1bxca_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.30

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		2	.	.	.	.	.	.	.	10	.	.	.	.														.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	F	A	A	N	L	S	M	M	F	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	Y	N	Y	S	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.							.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		H	R	F	T	F	G	.	L	W	T	V	G	N	V	G	R	D	P	F	G	D	A	V	R	E	R	L	D	P	V	Y	V	G	H	K	L	A	E	L	G	V	H	G	V	N	L	H	D	E	D	L	I	P	R	G	T	P	P	Q	E	R	D	Q	I	V	R	R	F	K	R	A	L	D	E	T	G	L	K	V	P
Template Known Secondary structure		G						.					T					B	T	T	B				S																T		S										S		S	S																					T		B
Template Predicted Secondary structure								.
Template SS confidence
		8	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure											.	.																																											.	.	.	.
Query SS confidence											.	.																																											.	.	.	.
Query Sequence		L	F	N	T	A	P	G	D	I	.	.	N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	.	.	.	.	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D
Query Conservation											.	.																																											.	.	.	.
Alig confidence											.	.																																											.	.	.	.
Template Conservation
Template Sequence		M	V	T	G	N	L	F	S	D	P	G	F	K	D	G	G	F	T	S	R	D	P	W	V	R	A	Y	A	F	R	K	S	L	E	T	M	D	L	G	A	E	L	G	A	E	I	Y	V	V	W	P	G	R	E	G	A	E	V	E	A	T	G	K	A	R	K	V	W	D	W	V	R	E	P	L	N	F	M	A	A
Template Known Secondary structure								S	S	S	G	G	G	T	T		S	T	T		S	S																					T	T									T	T				S		G	G	G		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		132	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.
Predicted Secondary structure								.	.																																				.																											.	.
Query SS confidence								.	.																																				.																											.	.
Query Sequence		R	F	A	P	H	G	.	.	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	.	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	.	.	K	Y	A	H	V	Q	I	A
Query Conservation								.	.																																				.																											.	.
Alig confidence								.	.																																				.																											.	.
Template Conservation
Template Sequence		Y	A	E	D	Q	G	Y	G	Y	R	F	A	L	E	P	K	P	N	E	P	R	G	D	I	Y	F	A	T	V	G	S	M	L	A	L	I	H	T	L	E	R	P	E	R	F	G	L	N	P	E	F	A	H	E	T	M	A	G	L	N	F	V	H	A	V	A	Q	A	L	D	A	G	K	L	L	H	I	D	L	N
Template Known Secondary structure							T											S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B						T	T	T														T		B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		207	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.
Predicted Secondary structure					.	.	.	.	.	.																																			.
Query SS confidence					.	.	.	.	.	.																																			.
Query Sequence		G	L	P	.	.	.	.	.	.	D	R	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q	G	W	I	G	C	E	Y	K	P	.	R	G	L	T	E	E	G	L
Query Conservation					.	.	.	.	.	.																																			.
Alig confidence					.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		G	Q	R	M	N	R	F	D	Q	D	L	R	F	G	S	E	N	L	K	A	A	F	L	L	V	D	L	L	E	S	S	G	Y	Q	G	P	R	H	F	D	A	H	A	L	R	T	E	D	E	E	G	V
Template Known Secondary structure		B			S	S	S	S				B		T	T	S	S															T	T			S										T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions