Job Description Q46891 Confidence 100.00% Date Thu Jan 5 12:35:33 GMT 2012 Rank 18 Aligned Residues 240 % Identity 15% Template c3obeB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	A	A	N	L	S	M	M	F	T	E	V	.	.	.	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I
Query Conservation															.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.								.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation							.																																																																								.	.	.
Template Sequence		K	X	G	L	Q	.	T	Y	S	L	G	Q	E	L	L	Q	D	X	P	N	G	L	N	R	L	A	K	A	G	Y	T	D	L	E	I	F	G	Y	R	E	D	T	G	K	F	G	D	Y	N	N	T	T	F	I	A	S	K	D	Y	K	K	X	V	D	D	A	G	L	R	I	S	S	S	H	L	T	P	.	.	.
Template Known Secondary structure							.	G	G	G	G	T					T	S											T	T									B		T	T	T	S		B									B												T	T							B				.	.	.
Template Predicted Secondary structure							.																																																																								.	.	.
Template SS confidence
		47	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S
Query Conservation
Alig confidence		.	.	.	.																																										.	.	.
Template Conservation		.	.	.	.																																										.	.	.
Template Sequence		.	.	.	.	S	L	R	E	Y	T	K	E	N	X	P	K	F	D	E	F	W	K	K	A	T	D	I	H	A	E	L	G	V	S	C	X	V	Q	P	S	L	P	R	I	E	.	.	.	N	E	D	D	A	K	V	V	S	E	I	F	N	R	A	G	E	I	T	K	K	A	G	I	L	W	G	Y	H	N	H	S
Template Known Secondary structure		.	.	.	.	S						G	G	G																			T		S											S	.	.	.	S																				T	T	T									S
Template Predicted Secondary structure		.	.	.	.																																										.	.	.
Template SS confidence
						125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		147															.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G	L	P	D	R	H
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Template Conservation																																																																														.	.
Template Sequence		N	E	F	K	R	V	L	K	A	G	E	K	P	E	Q	N	P	N	P	W	A	P	P	K	G	T	Y	I	E	E	L	F	L	K	N	T	D	P	D	K	V	X	F	E	L	D	V	Y	W	A	V	X	G	Q	Q	D	P	V	E	W	X	E	N	Y	P	N	R	F	K	L	L	H	I	K	D	R	.	.	W	I
Template Known Secondary structure		G	G	G	S					T	T					S	S			S	S	S				S											S		T	T	T													T	T										S	T	T	T									S	.	.	S	S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q	G	W	I	G	C	E	Y	.	.	.	.	.	.	.	K	P	R	G	L	T	E	E	G	L	G	W	F	D	A
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																											.				.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		I	G	D	S	G	X	X	N	F	P	N	I	F	K	K	A	Y	E	I	G	I	L	G	Y	Y	.	V	E	L	E	G	D	K	K	G	R	T	Q	F	E	G	V	E	K	S	A	A	Y	L	Q	A
Template Known Secondary structure		T	T		S	S	S														T						.							T	T
Template Predicted Secondary structure																											.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions