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Job DescriptionQ46891
Confidence34.65%DateThu Jan 5 12:35:33 GMT 2012
Rank204Aligned Residues158
% Identity8%Templatec3ngjC_
PDB info PDB header:lyaseChain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
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Query Sequence  FIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALA
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Template Sequence  IRKLCSEAAEYKFASVCVN. . . PTWVPLCAELLKGTGVKVCTVIGFPLGATP. . . . . . . . . . . . . . . SEVKAYETKVAVE
Template Known Secondary structure  T
S
...GGGTTTSS
STTT

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   24.....30.........40.. .......50.........60.........70.. .......80.....
 
   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  LNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFIQ
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Template Sequence  QGAEEVDMVINIGMV. . . KAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTN. . . . . . EEKVEVCKRCVAAGAEYVKTS
Template Known Secondary structure  TT
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...TT
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GGGS
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   86...90.........100 .........110.........120.........130..... ....140.........150......
 
   177..180.........190.........200.
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Query Sequence  LDTFHAQKVDGNLTHLIRDYAGKYA
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Template Sequence  TGFGTHGATPEDVKLMKDTVGDKAL
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   157..160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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