Job Description Q46891 Confidence 96.26% Date Thu Jan 5 12:35:33 GMT 2012 Rank 54 Aligned Residues 192 % Identity 13% Template c3hpxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644) Resolution 2.03 Å

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		15	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure											.	.	.																				.													.	.	.	.	.
Query SS confidence											.	.	.																				.													.	.	.	.	.
Query Sequence		V	P	F	I	E	R	F	A	A	.	.	.	A	R	K	A	G	F	D	A	V	E	F	L	F	P	Y	N	Y	S	T	.	L	Q	I	Q	K	Q	L	E	Q	N	H	L	.	.	.	.	.	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A
Query Conservation											.	.	.																				.													.	.	.	.	.
Alig confidence											.	.	.																				.													.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	P	A	R	K	R	R	M	F	D	L	L	V	R	M	G	Y	K	E	I	E	V	G	F	P	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E
Template Known Secondary structure																		T		S							T	T	T														T	T		S		T	T									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																					.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																										.	.	.
Query SS confidence																												.	.	.	.	.	.																										.	.	.
Query Sequence		D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	.	.	.	.	.	.	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	.	.	.	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S
Query Conservation																												.	.	.	.	.	.																										.	.	.
Alig confidence																												.	.	.	.	.	.																										.	.	.														.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		L	I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P	E	S	Y	T	G	.	.	.	.	.	.	T
Template Known Secondary structure										T	T	T		S																		T	T																									S	T	T	S										T	G	G	G	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.							.
		157	.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	Y	Q	A	L	A	I	V	E	E	V	.	.	.	.	.	.	.	.	.	A	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	.	.	.	.	.	.	.	A	H	V	Q	I	A	G	L	P	D	R	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.													.	.																			.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.
Template Sequence		E	L	E	Y	A	K	Q	V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	.	.	M	T	T	P	N	V	Y	A	D	S	I	E	W	M	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A	A	A	E	L	G	F
Template Known Secondary structure																					S	S	S									S	S		.	.		S																S	T	T	G	G	G								B		T	T	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
													212	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	H	E	P	D	D	.	.	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation
Template Sequence		A	A	G	A	D	R	I	E	G	C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D
Template Known Secondary structure			T	T							B	G	G	G		S	S	T	T		B		B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions