Job Description Q46891 Confidence 97.02% Date Thu Jan 5 12:35:33 GMT 2012 Rank 47 Aligned Residues 210 % Identity 12% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure															.	.											.	.	.															.	.
Query SS confidence															.	.											.	.	.															.	.
Query Sequence		M	P	R	F	A	A	N	L	S	M	M	F	T	.	.	E	V	P	F	I	E	R	F	A	A	.	.	.	A	R	K	A	G	F	D	A	V	E	F	L	F	P	.	.	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L
Query Conservation															.	.											.	.	.															.	.
Alig confidence															.	.											.	.	.															.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	K	K	I	Q	F	F	D	T	T	L	R	D	G	E	N	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T																					T		S							G	G	G																	S	S								S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	.	.	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P
Query Conservation																																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	G	D	I	D	R	A	E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.												T	T		S	S										S							T	T																				T	T		S								T	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	.	.	.	.	.	.	.	Y	A	H	V	Q	I	A	G	L	P	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																															.	.														.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																															.	.
Template Sequence		.	.	.	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	V	I	N	I	P	D	T	V	G	Y	T	N	P	.	.	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A	I	E	N	G	A
Template Known Secondary structure		.	.	.														T	T									S	S	S					.	.															T	T	G	G	G	S							B		T	T	S												T	T
Template Predicted Secondary structure		.	.	.																															.	.
Template SS confidence
					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
											212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	.	.	.	.	G	Y	Q
Query Conservation		.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		R	R	V	E	G	T	I	N	G	I	G	E	R	A	G	N	T	A	L	E	E	V	A	V	A	L	H	I	R	K	D	F	Y	Q	A	E
Template Known Secondary structure							B	G	G	G			T	T	T		B		B											T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions