Job Description Q46891 Confidence 34.36% Date Thu Jan 5 12:35:33 GMT 2012 Rank 206 Aligned Residues 134 % Identity 11% Template c3epmB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:thiamine biosynthesis protein thic; PDBTitle: crystal structure of caulobacter crescentus thic Resolution 2.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.
Template Sequence		D	K	L	V	W	A	T	R	W	G	A	D	T	V	X	D	L	S	T	G	R	N	I	H	N	I	R	D	W	I	I	R	N	S	S	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	V	A	E	D	L	N	W	.	.	.	.	.	.	.	E	V	F	R	D	T	L	I	E	Q	C	E	Q	G
Template Known Secondary structure										T	T		S								S	T	T											T		S	S														T	T	T		G	G	G				.	.	.	.	.	.	.														T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		V	D	Y	F	T	I	H	A	G	V	R	L	P	F	I	P	X	T	A	K	R	V	T	G	I	V	S	R	G	G	S	I	X	A	K	W	C	L	A	H	H	K	E	N	F	L	Y	E	R	F	D	E	I	C	E	I	X	R	A	Y	D	V	S	F	S	L	.	.	.	G	D	G	L	R	P	G	S	T	A	D
Template Known Secondary structure									T	T			T	T	T	G	G	G	G	T	T	S	S	S																			S							S									T	T	T	T						.	.	.			T	T			S	S	G	G	G
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.
		157	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	Y	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	D	E	A	Q
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions