Job Description Q46891 Confidence 94.30% Date Thu Jan 5 12:35:33 GMT 2012 Rank 59 Aligned Residues 203 % Identity 11% Template c3bg3B_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus) Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		S	M	M	F	T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	.	.	.	.	.	G	F	D	A	V	E	F	L	F	P	.	.	.	.	.	.	.	.	.	.	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L
Query Conservation																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	L	A	T	R	V	R	T	H	D	L	K	K	I	A	P	Y	V	A	H	N	F	S	K	L	F	S	M	E	N	W	G	G	A	T	F	D	V	A	M	R	F	L	Y	E	C	P	W	R	R	L	Q	E	L	R	E	L	I	P	N	I	P	F	Q	M	L	L	R	G	A	N	A	V	G	Y	T	N	Y	P
Template Known Secondary structure				S	T	T										T									T	T		S							T	T								T	S																S	S	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	N	V	V	F	K	F	C	E	V	A	K	E	N	G	M	D	V	F	R	V	F	D	S	L	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	M	L	L	G	M	E	A	A	G	S	A	G	G	V	V	E	A	A	I	S	Y	T	G	D	V	A	D	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.													T	T	T									T	T			.	.	.	.	.	.	.	.	.	.	.	.															T											S		T	T		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.													.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																					.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	.	.	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G	L	P	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.								.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		S	R	T	K	Y	S	L	Q	Y	Y	M	G	L	A	E	E	L	V	R	A	G	T	H	I	L	C	I	.	D	M	A	G	L	L	K	P	T	A	C	T	M	L	V	S	S	L	R	D	R	F	P	D	L	P	L	H	I	H	T	H	D	T	S	G	A	G	V	A	A	M	L	A	C	A	Q	A	G	A	D	V
Template Known Secondary structure		T			S	S																T		S					.		T	T																	T	T		T	T	S									T	T	S												T	T		S
Template Predicted Secondary structure																													.
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740		.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
									212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	V	A	A	D	S	M	S	G	M	T	S	Q	P	S	M	G	A	L	V	A	C	T	R	G	T	P	L	D
Template Known Secondary structure					B		G	G	G		S	T	T	S			B							T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions