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Job DescriptionQ46891
Confidence99.95%DateThu Jan 5 12:35:33 GMT 2012
Rank34Aligned Residues220
% Identity11%Templatec3bdkB_
PDB info PDB header:lyaseChain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RFAAARKA. GFDAVEFLF. . . . . . . . PYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLA
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Template Sequence  TLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVH. . . . . EDIKQGKPNRDALIENYKTS
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TSTT


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Query Sequence  LEYALALNCEQVHVMAGVVPAGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DAERYRAVFIDNIRYAADR
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Template Sequence  IRNVGAAGIPVVCYNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVAIIENYRQNISEEDLWANLEYFIKAILPT
Template Known Secondary structure  T



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B

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T

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Query Sequence  FAPHGKRILVEALSPGVK. . . PHYLFSSQYQALAIVEEVARDNVFIQLDTFHAQKVDG. NLTHLIRDYA. . GKYAHVQIA
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Template Sequence  AEEAGVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYDSEHNGITMCVGSYASDPKNDVLAMTEYALKRNRINFMHTR
Template Known Secondary structure  T


SSSS

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STTS
STTTTSTT

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Query Sequence  GLPDR. . . . . . . . HEPDDGEINYPWLFRLFDEVGYQGWIGCEYKPR
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Template Sequence  NVTAGAWGFQETAHLSQAGDIDMNAVVKLLVDYDWQGSLRPDHGRR
Template Known Secondary structure  TT
SSGGGSS

TT





B
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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