|   |
20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | |
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|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . |
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|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
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|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
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|
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|
| . |
. |
. |
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. |
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. |
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|
Query Sequence |   |
R | F | A | A | A | R | K | A | . |
G | F | D | A | V | E | F | L | F | . |
. |
. |
. |
. |
. |
. |
. |
P | Y | N | Y | S | T | L | Q | I | Q | K | Q | L | E | Q | N | H | L | T | L | A | L | F | N | T | A | P | G | D | I | N | A | G | E | W | G | L | S | A | L | P | G | R | E | H | E | A | H | A | D | I | D | L | A |
Query Conservation |   |
  |
|   |   |
|   |   |   | . |
|
|   |   |
|
|
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
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|
| . |
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|
| . | . | . | . | . | . | . | . |
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| . | . | . | . | . |
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Template Conservation |   |
|
|   |   |
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|   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |
|
|   |
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|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
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|   |
|   |   | . | . | . | . | . |   |   |
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|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
T | L | E | E | I | K | A | I | P | G | M | Q | G | I | V | T | A | V | Y | D | V | P | V | G | Q | A | W | P | L | E | N | I | L | E | L | K | K | M | V | E | E | A | G | L | E | I | T | V | I | E | S | I | P | V | H | . |
. |
. |
. |
. |
E | D | I | K | Q | G | K | P | N | R | D | A | L | I | E | N | Y | K | T | S |
Template Known Secondary structure |   |
|  |  |  |  |  | T | S | T | T |  |  |  |  |  |  |
|
|
| S | S |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|
| . | . | . | . | . |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
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|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
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. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
|
|
|
|
|
|
|
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|
| . |
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Query Sequence |   |
L | E | Y | A | L | A | L | N | C | E | Q | V | H | V | M | A | G | V | V | P | A | G | E | . |
. |
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. |
D | A | E | R | Y | R | A | V | F | I | D | N | I | R | Y | A | A | D | R |
Query Conservation |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|
Template Conservation |   |
|
|
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |
|
|
Template Sequence |   |
I | R | N | V | G | A | A | G | I | P | V | V | C | Y | N | F | M | P | V | F | D | W | T | R | S | D | L | H | H | P | L | P | D | G | S | T | S | L | A | F | L | K | S | D | L | A | G | V | D | P | V | A | I | I | E | N | Y | R | Q | N | I | S | E | E | D | L | W | A | N | L | E | Y | F | I | K | A | I | L | P | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
| S | S |
| S |
|
|
| S | B | S | S |
|
|
| T | T | S |
| B |
|
|  |  |  | S | S | S | S |
| S | S |
|
|
|
|  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
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|
|  |  |  |
|
|  |  |  |  |
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|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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|
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  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
. | . | 190 | . | . | . | . | . | . | . | |
|
. | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
| . |
. |
. |
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| . |
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| . |
. |
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|
Query Sequence |   |
F | A | P | H | G | K | R | I | L | V | E | A | L | S | P | G | V | K | . |
. |
. |
P | H | Y | L | F | S | S | Q | Y | Q | A | L | A | I | V | E | E | V | A | R | D | N | V | F | I | Q | L | D | T | F | H | A | Q | K | V | D | G | . |
N | L | T | H | L | I | R | D | Y | A | . |
. |
G | K | Y | A | H | V | Q | I | A |
Query Conservation |   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |   | . | . |   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
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|
| . | . | . |
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| . |
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|
| . | . |
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|
Template Conservation |   |
|
|
|   |
|
|   |
|
|
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|
|   |   |
|   |
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|   |
|   |
|   |   |   |
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|   |   |
|   |
|
|   |   |
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|   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
Template Sequence |   |
A | E | E | A | G | V | K | M | A | I | H | P | D | D | P | P | Y | G | I | F | G | L | P | R | I | I | T | G | Q | E | A | V | E | R | F | L | N | L | Y | D | S | E | H | N | G | I | T | M | C | V | G | S | Y | A | S | D | P | K | N | D | V | L | A | M | T | E | Y | A | L | K | R | N | R | I | N | F | M | H | T | R |
Template Known Secondary structure |   |
 |  |  |  | T |
|  |  |  |  |  |
|
| S | S | S | S |
|
| T | T |
|
|
|
|
|
| S |  |  |  |  |  |  |  |  | T | T | S |
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
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|
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
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|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
  |
  |   |
207 | . | . | 210 | . | |
|
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|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
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|
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|
|  |  |  |  |  |  |  |  |  |  |
|
|
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|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
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Query Sequence |   |
G | L | P | D | R | . |
. |
. |
. |
. |
. |
. |
. |
H | E | P | D | D | G | E | I | N | Y | P | W | L | F | R | L | F | D | E | V | G | Y | Q | G | W | I | G | C | E | Y | K | P | R |
Query Conservation |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
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Template Conservation |   |
|
|   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|   |
|   |
|
|
|   |   |
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|   |
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|   |   |   |
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|   |
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Template Sequence |   |
N | V | T | A | G | A | W | G | F | Q | E | T | A | H | L | S | Q | A | G | D | I | D | M | N | A | V | V | K | L | L | V | D | Y | D | W | Q | G | S | L | R | P | D | H | G | R | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
289 | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
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