Job Description Q46891 Confidence 37.66% Date Thu Jan 5 12:35:33 GMT 2012 Rank 189 Aligned Residues 193 % Identity 11% Template c2yswB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5 Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																											.	.																																															.	.	.	.	.	.	.
Query SS confidence																											.	.																																															.	.	.	.	.	.	.
Query Sequence		T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	.	.	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	.	.	.	.	.	.	.
Query Conservation																											.	.																																															.	.	.	.	.	.	.
Alig confidence																											.	.																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	T	N	F	S	E	N	L	K	K	A	K	E	K	G	A	D	I	V	E	L	R	V	D	Q	F	S	D	T	S	L	N	Y	V	K	E	K	L	E	E	V	H	S	Q	G	L	K	T	I	L	T	I	R	S	P	E	E	G	G	R	E	V	K	N	R	E	E	L	F	E	E	L	S	P	L	S	D	Y	T
Template Known Secondary structure			S	T	T											T	T		S						G	G	G		S																	T	T										G	G	G	T					T	T									G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
								84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S	S
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.																								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	E	L	S	S	R	G	L	L	V	K	L	Y	N	I	T	K	E	A	G	K	K	L	I	I	S	Y	H	N	.	.	F	E	L	T	P	P	N	W	I	I	R	E	V	L	R	E	G	Y	R	Y	G	G	I	.	.	.	.	.	P	K	I	A	V	K	A	.	.	.	.	.	.	.	.	.	.	.	N	S
Template Known Secondary structure					T	T															T	T										.	.	S	S																		T	T	S		.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																.	.																								.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.												.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G	L	P	D	R	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E
Query Conservation
Alig confidence																						.	.																															.	.	.	.	.
Template Conservation																						.	.																															.	.	.	.	.
Template Sequence		Y	E	D	V	A	R	L	L	C	I	S	R	Q	V	E	G	E	K	I	L	.	.	I	S	M	G	D	Y	G	K	I	S	R	L	A	G	Y	V	F	G	S	V	I	T	Y	C	S	L	E	K	A	F	.	.	.	.	.	A	P	G	Q	I	P	L	E	E	M	V	E	L	R	K	K
Template Known Secondary structure													T	T	S		S		B			.	.				T	T	G	G	G	G					G	G	G	G	T	B						B	S	S	S			.	.	.	.	.	S	T	T			B
Template Predicted Secondary structure																						.	.																															.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions