Job Description Q46891 Confidence 100.00% Date Thu Jan 5 12:35:33 GMT 2012 Rank 30 Aligned Residues 246 % Identity 14% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	R	F	A	A	N	L	S	M	M	F	T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	.	.	.	.	.	.	.	.	.	.	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																								.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation													.	.	.																																																															.	.	.
Template Sequence		M	I	K	I	G	A	H	M	P	I	S	.	.	.	K	G	F	D	R	V	P	Q	D	T	V	N	I	G	G	N	S	F	Q	I	F	P	H	N	A	R	S	W	S	A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S	G	Y	L	.	.	.	I
Template Known Secondary structure												T	.	.	.	T		G	G	G								T	T		S						S				S	S	S																					T			G	G	G							T	T	.	.	.
Template Predicted Secondary structure													.	.	.																																																															.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K
Query Conservation
Alig confidence																																												.																			.	.																	.
Template Conservation																																												.																			.	.																	.
Template Sequence		N	L	A	S	P	K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	S	H	L	G	T	.	G	E	E	E	G	I	D	R	I	V	R	G	L	N	E	V	L	N	.	.	N	T	E	G	V	V	I	L	L	E	N	V	S	Q	K	G	.
Template Known Secondary structure			T	T		S	S																						T												T	T	S	.																		T	.	.	T			S												T	.
Template Predicted Secondary structure																																												.																			.	.																	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																					.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.	.	.	.	.
Query SS confidence																					.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.	.	.	.	.
Query Sequence		P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	.	R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	.	.	.	.	.	.	H	L	I	R	D	Y	A	.	.	.	.	.	G	K	Y	A	H	V	Q	I	A	G	L	P	D	.	.	.	.	.	.	.	.
Query Conservation																					.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.	.	.	.	.
Alig confidence		.																			.																						.	.	.	.	.	.								.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	G	N	I	G	Y	K	L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G	Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	Y	P	L	G	A	A	K	D	R
Template Known Secondary structure		.	T				S	S												S		G	G	G													T	T			T	T	S															T		G	G	G										S	S		T	T
Template Predicted Secondary structure		.
Template SS confidence
			151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																												.						.	.	.	.	.
Query SS confidence																												.						.	.	.	.	.
Query Sequence		R	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q	G	W	.	I	G	C	E	Y	.	.	.	.	.	K	P	R	G	L	T	E	E	G	L	G	W	F	D	A	W
Query Conservation																												.						.	.	.	.	.
Alig confidence																												.						.	.	.	.	.
Template Conservation
Template Sequence		H	E	R	I	G	S	G	F	I	G	E	E	G	F	A	V	F	F	S	F	K	E	I	Q	E	V	P	W	I	L	E	T	P	G	G	N	E	E	H	A	E	D	I	K	K	V	F	E	I	I	E	K	F
Template Known Secondary structure					T	T	S	S	S	S										T						T	S							S	S																			T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions