Return to main results Retrieve Phyre Job Id

Job DescriptionQ46891
Confidence39.54%DateThu Jan 5 12:35:33 GMT 2012
Rank181Aligned Residues117
% Identity11%Templatec2vfwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase; PDBTitle: rv1086 native
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  EHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQY
Query Conservation             
  
  

   
                       
      
   

 
 

                
Alig confidence 




































































...







Template Conservation 
  
   
  
  

   

  



 

 

  
   

  
  
                
   

 ...  
     
Template Sequence  YRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDL. . . GLIGEEPA
Template Known Secondary structure  T
S

BTTGGGS
T
TTT

S
G...GGS
Template Predicted Secondary structure 













...

Template SS confidence 















































































   58.60.........70.........80.........90.........100.........110.........120...... ...130....
 
   160.........170.........180.........190.........
Predicted Secondary structure 













Query SS confidence 







































Query Sequence  QALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGK
Query Conservation      
             
  
    
            
Alig confidence 







































Template Conservation           
       


   
 

 

  
 
 
   
Template Sequence  RRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSK
Template Known Secondary structure  TS
SS
S

SB
Template Predicted Secondary structure 









Template SS confidence 







































   135....140.........150.........160.........170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions