Job Description Q46891 Confidence 26.08% Date Thu Jan 5 12:35:33 GMT 2012
Rank 245 Aligned Residues 91
% Identity 16% Template c2ph5A_
PDB info
PDB header: transferaseChain: A: PDB Molecule: homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
4 . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
F A A N L S M M F T E V P F I E R F A A A R K A G F D A V E F L F P Y N Y S .
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T L Q I Q K Q L E Q N H L T .
L A L F N T A P G D I N A G .
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Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
F L I D V S I G I S S L .
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A L I I L C N Q K G A L Y I N A A T E P W K E R R T N Y S L R E E V L R L K D K T Q K T A L I T H G A N P G L V S H F I K E A L L
Template Known Secondary structure  
S S S . . . T S S T T T T T S S B T T T B
Template Predicted Secondary structure  
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Template SS confidence  
   
86 . . . 90 . . . . . . .
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70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
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E W G L S A L P G R E H E A H A D I D L A L E Y A L A L N C E Q V H V
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
N I A K D N G L T I N R P K N A .
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A E W A N L A X T L G I K V I H V
Template Known Secondary structure  
T T T S . . . . . . . T T
Template Predicted Secondary structure  
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Template SS confidence  
   
173 . . . . . . 180 . . . . . . . .
. 190 . . . . . . . . . 200 . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]