Job Description Q46891 Confidence 83.40% Date Thu Jan 5 12:35:33 GMT 2012 Rank 80 Aligned Residues 106 % Identity 9% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																															.
Template Sequence		L	K	G	R	L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	Q	T	D	L	L	Q	I	D	P	N	F	G	S	K	E	D	F	D	S	L	L	Q	S	A	K	K	K	S	I	R	V	.	I	L	D	L	T	P	N	Y	R	G	E	N	S	W	F	S	T	Q
Template Known Secondary structure			G	G	G						T	T	T														T	T		S	T	T								T	T	T																T	T				.						T	T	T	T	S	S	S	T	T	S	S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	M	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A
Query Conservation
Alig confidence																		.	.	.	.													.	.
Template Conservation																		.	.	.	.													.	.
Template Sequence		V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	.	.	.	.	Q	A	G	V	D	G	F	Q	V	R	D	I	.	.	E	N	L	K	D	A	S	S	F	L	A	E	W	Q	N	I	T	K	G	F
Template Known Secondary structure			T															.	.	.	.		T	T									G	.	.	G	G	S	T	T
Template Predicted Secondary structure																		.	.	.	.													.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions