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Job Description | Q46891 | Confidence | 21.70% | Date | Thu Jan 5 12:35:33 GMT 2012 |
Rank | 270 | Aligned Residues | 100 |
% Identity | 15% | Template | c1njjC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:ornithine decarboxylase; |
PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418
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Resolution | 2.45 Å |
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38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | N | Y | S | T | L | Q | I | Q | K | Q | L | E | Q | N | H | L | T | L | A | L | F | N | T | A | P | G | D | I | N | A | G | E | W | G | L | S | A | L | P | G | R | E | H | E | A | H | A | D | I | D | L | A | L | E | Y | A | L | A | L | N | C | E | Q | V | H | V | M | . |
A | G | V | V | P | A | G | E | D | A | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | E | D | C | R | F | I | L | E | Q | A | K | K | L | N | I | D | V | T | G | V | S | F | H | V | G | S | G | S | T | . |
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D | A | S | T | F | A | Q | A | I | S | D | S | R | F | V | F | D | M | G | T | E | L | G | F | N | M | H | I | L | D | I | G | G | G | F | P | G | T | R | D | A | P |
Template Known Secondary structure |   |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
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. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
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117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | Y | R | A | V | F | I | D | N | I | R | Y | A | A | D | R | F | . |
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A | P | H | G | K | R | I | L | V | E | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | K | F | E | E | I | A | G | V | I | N | N | A | L | E | K | H | F | P | P | D | L | K | L | T | I | V | A | E | P |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
246 | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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