Job Description P0A6G7 Confidence 99.07% Date Thu Jan 5 11:03:07 GMT 2012 Rank 47 Aligned Residues 140 % Identity 14% Template c3r0oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Resolution 2.10 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	D	H	M	A	N	L	I	V	A	Q	M	L	F	L	E	A	E	N	P	E	K	D	I	Y	L	Y	I	N	.	.	.	.	.	S	P	G	G	V	I	T	A	G	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	D	T	M	Q	F	I	K	P	D	V	S	T	I	C	M	G	Q	A
Query Conservation																																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	G	A	V	S	T	A	V	G	D	A	L	E	E	A	Q	R	D	P	E	V	W	A	V	V	I	T	G	A	G	D	K	S	F	C	A	G	A	D	L	K	A	I	S	R	G	E	N	L	Y	H	A	E	H	P	E	W	G	F	A	G	Y	V	H	H	F	I	D	K	P	T	I	A	A	V	N	G	T	A
Template Known Secondary structure		B																			T	T									S	S	S	S	B	S				B							T	T				S		S	S		G	G	G		G	G	G	T	T	T				S	S								S	B
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	M	G	A	F	L	L	T	A	G	A	K	G	K	R	F	C	L	P	N	S	R	V	M	I	H	Q	P	L	G	G	Y	Q	G	Q	A	T	D	I	E	I	H	A	R	E	I	L	K	V	K	G	R	M	N	E	L	M	A	L	H	T	G	Q	S	L	E	Q	I	E	R	D	T	E	R	D	R	F	L	S
Query Conservation
Alig confidence														.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	G	G	S	E	L	A	L	A	S	D	.	.	L	V	I	A	C	E	S	A	S	F	G	L	P	E	V	K	R	G	L	I	A	G	A	G	G	V	F	R	I	V	E	Q	L	P	R	K	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	V	L	T	G	E	P	M	T
Template Known Secondary structure			T									S	S	.	.						T	T						G	G	G	G	T	T	S			T	T	T									S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																		.	.	.	.	170	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	A	V	E	Y	G	L	V	D	S	I	L	T	H	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	D	A	L	R	W	G	L	I	N	E	V	V	P	D	G	T
Template Known Secondary structure									T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions