Job Description P0A6G7 Confidence 98.87% Date Thu Jan 5 11:03:07 GMT 2012 Rank 79 Aligned Residues 140 % Identity 14% Template c3m6nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff Resolution 1.80 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.																							.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	D	H	M	A	N	L	I	V	A	Q	M	L	F	L	.	.	.	.	E	A	E	N	P	E	K	D	I	Y	L	Y	I	N	.	.	.	.	.	S	P	G	G	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	G	M	S	I	Y	D	T	M	Q	F	I
Query Conservation																		.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.															.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	T	R	L	V	D	D	I	T	G	Y	Q	T	N	L	G	Q	R	L	N	T	A	G	V	L	A	P	H	V	V	L	A	S	D	S	D	V	F	N	L	G	G	D	L	A	L	F	C	Q	L	I	R	E	G	D	R	A	R	L	L	D	Y	A	Q	R	C	V	R	G	V	H	A	F	H	V	G	L	G	A
Template Known Secondary structure		B																							T		S	S								S	S	S	S	S	B			B												T																					T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	V	S	T	I	C	M	G	Q	A	A	S	M	G	A	F	L	L	T	A	G	A	K	G	K	R	F	C	L	P	N	S	R	V	M	I	H	Q	P	L	G	G	Y	Q	G	Q	A	T	D	I	E	I	H	A	R	E	I	L	K	V	K	G	R	M	N	E	L	M	A	L	H	T	G	Q	S	L	E	Q
Query Conservation
Alig confidence																										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	H	S	I	A	L	V	Q	G	N	A	L	G	G	G	F	E	A	A	L	S	C	H	.	.	T	I	I	A	E	E	G	V	M	M	G	L	P	E	V	L	F	D	L	F	P	G	M	G	A	Y	S	F	M	C	Q	R	I	S	A	H	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T									S				T									S	S	.	.						T	T						G	G	G	G	G	T					S	S						T	T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	D	T	E	R	D	R	F	L	S	A	P	E	A	V	E	Y	G	L	V	D	S	I	L	T	H	R	N
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	K	I	M	L	E	G	N	L	Y	S	A	E	Q	L	L	G	M	G	L	V	D	R	V	V	P	R	G	Q
Template Known Secondary structure		.	.																		T	S		S					T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions